Print method for objects of the class summaryAlphaPart.
print.summaryAlphaPart.Rd
Print method for objects of the class
summaryAlphaPart
(result of summary(AlphaPart(...))
).
Usage
# S3 method for summaryAlphaPart
print(x, ...)
Arguments
- x
summaryAlphaPart, output object from
summary.AlphaPart
function.- ...
Arguments passed to other functions (not used at the moment).
Examples
## --- Partition additive genetic values by loc ---
res <- AlphaPart(x=AlphaPart.ped, colPath="country", colBV=c("bv1", "bv2"))
#>
#> Size:
#> - individuals: 8
#> - traits: 2 (bv1, bv2)
#> - paths: 2 (domestic, import)
#> - unknown (missing) values:
#> bv1 bv2
#> 0 0
## Summarize whole population
ret <- summary(res)
## Summarize population by generation (=trend)
ret <- summary(res, by="gen")
## Summarize population by generation (=trend) but only for domestic location
ret <- summary(res, by="gen", subset=res[[1]]$country == "domestic")
## --- Partition additive genetic values by loc and gender ---
AlphaPart.ped$country.gender <- with(AlphaPart.ped, paste(country, gender, sep="-"))
res <- AlphaPart(x=AlphaPart.ped, colPath="country.gender", colBV=c("bv1", "bv2"))
#>
#> Size:
#> - individuals: 8
#> - traits: 2 (bv1, bv2)
#> - paths: 4 (domestic-F, domestic-M, import-F, import-M)
#> - unknown (missing) values:
#> bv1 bv2
#> 0 0
## Summarize population by generation (=trend)
ret <- summary(res, by="gen")
## Summarize population by generation (=trend) but only for domestic location
ret <- summary(res, by="gen", subset=res[[1]]$country == "domestic")